Get reference to a directive used in a component

You can use exportAs property of the @Directive annotation. It exports the directive to be used in the parent view. From the parent view, you can bind it to a view variable and access it from the parent class using @ViewChild().

Example With a plunker:

@Directive({
  selector:'[my-custom-directive]',
  exportAs:'customdirective'   //the name of the variable to access the directive
})
class MyCustomDirective{
  logSomething(text){
    console.log('from custom directive:', text);
  }
}

@Component({
    selector: 'my-app',
    directives:[MyCustomDirective],
    template: `
    <h1>My First Angular 2 App</h1>

    <div #cdire=customdirective my-custom-directive>Some content here</div>
    `
})
export class AppComponent{
  @ViewChild('cdire') element;

  ngAfterViewInit(){
    this.element.logSomething('text from AppComponent');
  }
}

Update

As mentioned in the comments, there is another alternative to the above approach.

Instead of using exportAs, one could directly use @ViewChild(MyCustomDirective) or @ViewChildren(MyCustomDirective)

Here is some code to demonstrate the difference between the three approaches:

@Component({
    selector: 'my-app',
    directives:[MyCustomDirective],
    template: `
    <h1>My First Angular 2 App</h1>

    <div my-custom-directive>First</div>
    <div #cdire=customdirective my-custom-directive>Second</div>
    <div my-custom-directive>Third</div>
    `
})
export class AppComponent{
  @ViewChild('cdire') secondMyCustomDirective; // Second
  @ViewChildren(MyCustomDirective) allMyCustomDirectives; //['First','Second','Third']
  @ViewChild(MyCustomDirective) firstMyCustomDirective; // First

}

Update

Another plunker with more clarification