You need to modify your client-side script to check for the tested element’s prefix, and add the prefix (if any) to your selector, as follows:
$.validator.addMethod("isdateafter", function(value, element, params) {
var parts = element.name.split(".");
var prefix = "";
if (parts.length > 1)
prefix = parts[0] + ".";
var startdatevalue = $('input[name="' + prefix + params.propertytested + '"]').val();
if (!value || !startdatevalue)
return true;
return (params.allowequaldates) ? Date.parse(startdatevalue) <= Date.parse(value) :
Date.parse(startdatevalue) < Date.parse(value);
});